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RFP-Catcher (agarose magnetic beads)

RIP, Co-IP, IP, Purif, ChIP Antibody Magnetic Agarose beads 90 μm
N° du produit ABIN7529450
  • Antigène Tous les produits RFP
    RFP (Red Fluorescent Protein (RFP))
    Reactivité
    Discosoma
    Expression System
    E.coli
    Application
    RNA-Binding Protein Immunoprecipitation (RIP), Protein Complex Immunoprecipitation (Co-IP), Immunoprecipitation (IP), Purification (Purif), Chromatin Immunoprecipitation (ChIP)
    Fonction
    RFP-Catcher is based on a high-affinity single-domain antibody (sdAb) that is covalently immobilized on 4% cross-linked magnetic agarose.
    Specificité
    MRFP (red fuorescent protein) and other derivatives like mOrange, dsRed1, dsRED2, tdTomato, mCherry and mScarlet-i.
    Réactivité croisée (Details)
    Does not cross-react with GFP or mTagBFP derivatives.
    Attributs du produit
    RFP-Catcher is based on a high-affinity single-domain antibody (sdAb) that is covalently immobilized on 4 % cross-linked magnetic agarose beads. The innovative, oriented and selective attachment via a flexible linker guarantees a high accessibility of the sdAbs and largely eliminates batch-to-batch variations. Due to the single-chain nature of sdAbs and their covalent attachment, no "leakage" of light and heavy chains from IgGs is observed during elution with SDS sample buffer.
    RFP-Catcher thus features high affinity and superior capacity for RFP fusion proteins while showing negligible non-specific background.
    RFP-Catcher immobilizes a wide range of RFP derivatives.
    RFP-Catcher is compatible not only with physiological buffers but also with high stringency buffers.
    RFP-Catcher thus provides great freedom to adjust the binding and washing conditions to the experimental needs.
    Bead Ligand
    Antibody
    Bead Matrix
    Magnetic Agarose beads
    Bead Size
    90 μm
  • Indications d'application
    Capacity: > 3 μg RFP per μl of packed beads
    Protocole

    This protocol provides a general outline of how to use RFP-Catcher (agarose magnetic beads) for immunoprecipitation using a microcentrifuge for sedimentation. Alternatively, it is possible to use RFP-Catcher agarose beads in spin columns. All protocol steps should be carried out at 4 °C.

    Protocol as PDF

    1. For mammalian cells, harvest 106-108 cells per sample.
    2. Lyse cells according to established protocols in 0.2 to 1.5 mL volume. Recommended Buffer Conditions: RFP-Catcher resins are compatible with commonly used Lysis and Washing buffers, e.g. RIPA buffer. The following buffer conditions have been tested:
      • pH ranging from pH 5 to pH 9
      • 2 % Triton X-100, 1 % Tween-20, 1 % NP-40, 1 % CHAPS, 1 % Deoxycholate, 0.1 % SDS
      • 4 M NaCl, 2 M KCl, 1 M MgCl2
      • 100 mM EDTA
      • 4 M urea
      • 10 mM DTT, 10 mM 2-Mercaptoethanol
      • Protease Inhibitors
      • RNAse A, DNAse I, Benzonase
    3. Centrifuge cell lysates in microcentrifuge tubes for 10 min at 14.000 x g at 4 °C. Keep a small samples as “input” fraction.
    4. Transfer the supernatant to a fresh microcentrifuge tube for each sample and keep at 4 °C.
    5. Homogenize the RFP-Catcher (agarose magnetic beads) slurry gently by shaking.
    6. Transfer 20 μL bead slurry to a 1.5 mL microcentrifuge tube for each sample.
    7. Add 1 mL Lysis Buffer to equilibrate RFP-Catcher (agarose magnetic beads).
    8. Place the tubes on a magnet stand until the fluid is clear. Remove the supernatant carefully.
    9. Repeat wash steps once for a total of two washes.
    10. Resuspend equilibrated RFP-Catcher (agarose magnetic beads) gently with the cell lysate supernatant.
    11. Rotate the microcentrifuge tubes for 1 h at 4 °C.
    12. Place the tubes on a magnet stand until the fluid is clear. Keep a small aliquot of the supernatant as “unbound” fraction. Carefully remove the supernatant.
    13. Resuspend RFP-Catcher (agarose magnetic beads) in 1 mL Lysis Buffer.
    14. Place the tubes on a magnet stand until the fluid is clear and carefully remove the supernatant.
    15. Repeat wash steps twice for a total of three washes.
    16. Resuspend RFP-Catcher (agarose magnetic beads) gently in 1 mL TBS.
    17. Place the tubes on a magnet stand until the fluid is clear and carefully remove the supernatant.
    18. Repeat wash steps once for a total of two washes.
    19. Resuspend RFP-Catcher (agarose magnetic beads) resin in 50 µL 2X SDS samples buffer.
    20. Heat RFP-Catcher (agarose magnetic beads) resin for 5 min to 95 °C.
    21. Place the tubes on a magnet stand until the fluid is clear and transfer the supernatant to fresh microcentrifuge tubes. Keep the RFP-Catcher (agarose magnetic beads) as backup.
    Restrictions
    For Research Use only
  • Buffer
    50 % slurry in PBS containing 20 % Ethanol
    Stock
    4 °C
    Stockage commentaire
    Store at 4 °C, Do not freeze!
    Date de péremption
    12 months
  • Antigène
    RFP (Red Fluorescent Protein (RFP))
    Autre désignation
    RFP (RFP Produits)
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